Geneious Plugins
Geneious InterProScan Plugin – A plugin for the bioinformatics software package Geneious that enables you to analyze proteins with InterProScan.
Augustus Plugin – a Geneious plugin for running the popular program for ab initio gene annotation for eukaryotes.
Command line utilities
RunIprScan – A command line utility for interfacing with the InterproScan server at the European Bioinformatics Institute.